NOBLAST and JAMBLAST: New Options for BLAST and a Java Application Manager for BLAST results

نویسندگان

  • Jacques Lagnel
  • Costas S. Tsigenopoulos
  • Ioannis Iliopoulos
چکیده

UNLABELLED NOBLAST (New Options for BLAST) is an open source program that provides a new user-friendly tabular output format for various NCBI BLAST programs (Blastn, Blastp, Blastx, Tblastn, Tblastx, Mega BLAST and Psi BLAST) without any use of a parser and provides E-value correction in case of use of segmented BLAST database. JAMBLAST using the NOBLAST output allows the user to manage, view and filter the BLAST hits using a number of selection criteria. AVAILABILITY A distribution package of NOBLAST and JAMBLAST including detailed installation procedure is freely available from http://sourceforge.net/projects/JAMBLAST/ and http://sourceforge.net/projects/NOBLAST. SUPPLEMENTARY INFORMATION Supplementary data are available at Bioinformatics online.

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عنوان ژورنال:
  • Bioinformatics

دوره 25 6  شماره 

صفحات  -

تاریخ انتشار 2009